Browse of TCMCG007C38925 protein

CDS

Accession Number	TCMCG007C38925
gbkey	CDS
Protein Id	XP_018515015.1
Location	complement(join(21721728..21721844,21721955..21722222,21722224..21722231,21722801..21723085,21723252..21723470,21723607..21723775,21723871..21724048,21724197..21724308,21725159..21725359))
Gene	LOC103874805
GeneID	103874805
Organism	Brassica rapa

Protein

Length	519aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA249065
db_source	XM_018659499.2
Definition	LOW QUALITY PROTEIN: squalene epoxidase 4 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category	I
Description	squalene
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	R02874        [VIEW IN KEGG]
KEGG_rclass	RC00201        [VIEW IN KEGG]
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko01000        [VIEW IN KEGG]
KEGG_ko	ko:K00511        [VIEW IN KEGG]
EC	1.14.14.17        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko00100        [VIEW IN KEGG] ko00909        [VIEW IN KEGG] ko01100        [VIEW IN KEGG] ko01110        [VIEW IN KEGG] ko01130        [VIEW IN KEGG] map00100        [VIEW IN KEGG] map00909        [VIEW IN KEGG] map01100        [VIEW IN KEGG] map01110        [VIEW IN KEGG] map01130        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0004497        [VIEW IN EMBL-EBI] GO:0004506        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005783        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0012505        [VIEW IN EMBL-EBI] GO:0016491        [VIEW IN EMBL-EBI] GO:0016705        [VIEW IN EMBL-EBI] GO:0016709        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0055114        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCAACGACATACACGTGGTTATGGACGCTTCTCGCCTTCATTCTGACATGGATGGTTTTTCACCTCATCAAAAGAAAGAAGGTTGGAACAGAAGAGACAGAGGTCGATGCAGAAGAGACCAGAGATGGTGAGGCTCATGATGTCATCATTGTTGGGGCGGGTGTGGCAGGCGCGGCTCTTGCTTATGCTCTTGCTAAGGATGGGCGGCGAGTACATGTGATAGAGAGAGACTTGAAAGAACCTCAAAGATTTATGGGAGAGCTGATGCAACCGGGTGGACGCCTCATGTTAGCTCAGCTTGGCCTTGAAGATTGTTTGGAGGAGATAGACGCTCAAGAAATAAAGTCATTGGCAATTTACAAGGACGGGAAAAACGACACCTTGTATTTTCCGGATAACAAAAATTTTCCTTATGAATCTGCCGGTAGACTCTTACGTAATGGCCGTCTGGTACAACGTCTACGCAAAAAGGCAGCTTCTCATGCCAATGTGCAACTCGAAGAAGGAACGGTGAAGTTTTTGATAGAAGAAAAAGGAGTGGTTAAGGGAGTGATATACAAGAATAGTGCAGGCGAAGAAATAACTGCCTTTGCACCTCTCACTGTGGTATGCGACGGTTGCTACTCGAACCTTCGCCTGTCAGCCGTCCATAATAAAGTGGAAGTGCTCTCTTATTTTGTGGGTTACGTCACGAAGAATACCCGACTTGAAGATCCACATAGTATGCATCTGATTTTTTCTAAACCTTTACCATGTGTTGTATATCAAATAACAAGCAATGAGGTTCGTTGTGCTGCCGAGGTTCCTGCTGATAGCATTCCTTCTATAGCAAATGGCGAAATGGTTAACTTTCTCAAGAAAACTGTGGCTCCTCAGATACCAGATGGAAATCTCCGTGAGACATTTTTGAAAGGGGTTGAGGAGGGACTACTAGAAATAAAAACAACTGCGACTAAGAGTATGTCAGCGAAGCAGTGTGATAAGAAAGGAGTGATTGTGTTGGGAGATGCATTCAATATGCGTCATCCTATAATCGCTTCAGGGATGATGGTTGCACTCTCTGACGTTCTCATTTTACGCAATCTTCTCAGGCCAGTGCCTAGCTTTAGCAATACTAAGAAGGTCTTGGAGCTTGTTAAGTCCTTTTACATCATCCGCAAGCCAATGTCGAACACGCTGGCGCATGTCTTCTCAGAAGTGCTTGTTGCTATAACGGACGAAGCAAGAGAGGGAATGCGAGAAAGCTGCTTTAATTACCTCTCCAGGACCAGTGGTGGTTTCCGAACATCCGGAATGATGGCTATTCTTGGAGGCATGAACCCTCGTCCCCTTAGTCTAGTTTTTCATCTTGTATGCATCACCCTCACCGCCATGGGCCACTTGCTCTCTCCATTTCCTTCGCCTCGTCGCTTTTGGCATAGCCTCAGAGTTTTTGCGTTGGCTTTGAAAATGTTGGGTGCACATTTGGGGGATGAAGGGTTGAAAGAGATGTTGATCCCAACAAACGCAGCTTCCTATCGCAAAAGCTATATGACCACGGCCTCCGACTGTTGA

Protein:   MATTYTWLWTLLAFILTWMVFHLIKRKKVGTEETEVDAEETRDGEAHDVIIVGAGVAGAALAYALAKDGRRVHVIERDLKEPQRFMGELMQPGGRLMLAQLGLEDCLEEIDAQEIKSLAIYKDGKNDTLYFPDNKNFPYESAGRLLRNGRLVQRLRKKAASHANVQLEEGTVKFLIEEKGVVKGVIYKNSAGEEITAFAPLTVVCDGCYSNLRLSAVHNKVEVLSYFVGYVTKNTRLEDPHSMHLIFSKPLPCVVYQITSNEVRCAAEVPADSIPSIANGEMVNFLKKTVAPQIPDGNLRETFLKGVEEGLLEIKTTATKSMSAKQCDKKGVIVLGDAFNMRHPIIASGMMVALSDVLILRNLLRPVPSFSNTKKVLELVKSFYIIRKPMSXNTLAHVFSEVLVAITDEAREGMRESCFNYLSRTSGGFRTSGMMAILGGMNPRPLSLVFHLVCITLTAMGHLLSPFPSPRRFWHSLRVFALALKMLGAHLGDEGLKEMLIPTNAASYRKSYMTTASDC